
Organoid technology began in 2009, and the Hans Clevers team at the
Hubrecht Institute in the Netherlands successfully cultured adult stem cells
into crypts and villus structures of the small intestine.
Table of contents
1. The concept of organoids
2. History of organoid development
3. Cultivation of organoids
4. Application of organoids
5. The industrial chain of organoids
6. The market structure of organoids
7. The challenge of organoids
8. The future development of organoids
-01-
The concept of organoids
Organoids refer to tissue analogs with a certain spatial structure formed
by using adult stem cells or pluripotent stem cells for in vitro
three-dimensional (3D) culture. Although organoids are not real human organs,
they can simulate real organs in structure and function, simulate tissue
structure and functions in the body to the greatest extent, and can be passed
down and cultivated for a long time and stably for a long time.
Currently, organoids are divided into two categories: tissue-derived
organoids and pluripotent stem cells-derived organoids.
Compared with traditional two-dimensional culture models, organoids
represent an innovative technology that can summarize the physiological
processes of the entire organism, with advantages such as closer to
physiological cell composition and behavior, a more stable genome, and more
suitable for biological transfection and high-throughput screening. Compared
with animal models, the operation of the organoid model is simpler and can also
be used to study mechanisms such as disease occurrence and development.
Therefore, it has extensive application prospects in the fields of organ
development, precision medicine, regenerative medicine, drug screening, gene
editing, disease modeling, etc. In 2013, organoids were rated as one of the top
ten technologies of the year by Science magazine. In early 2018, organoids were
rated as the 2017 Methods by Nature Methods.
Search for the entry "organoids" on Pubmed, the articles related to
organoids have jumped from 42 articles in 2010 to 2097 articles in just ten
years. Organoids have become a hot research topic with a very rapid trend.
-02-
History of organoid development
The origin of organoids can be traced back to 1907. H. V. Wilson, a
44-year-old professor at the University of Becrolena in the United States,
discovered that mechanically separated sponge cells can regroup and
self-organize into new sponge organisms with normal functions. His research
results were published in 1910. Wilson's research demonstrates that adult
organisms have complete information and can successfully develop into new
organisms without external help and without starting from a specific anatomical
stage.
For organoid technology, another very critical opportunity is the
development of stem cell technology. I believe everyone is familiar with stem
cells. Many people’s first impression of stem cells comes from the media’s
introduction to hematopoietic stem cell transplantation therapy for blood
diseases. The hot stem cell research in recent years mainly began at the end of
the last century. In 1987, A. J. Friedenstein discovered mesenchymal stem cells
(MSCs). In 1998, American biologist James Thomson first isolated human embryonic
stem cells. In 2007, Professor Shinya Yamaakashi successfully produced induced
Pluripotent Stem Cells (iPSCs). Today, most types of non-tumor-derived human
organoids can develop from MSCs or iPSCs, and the rapid progress of stem cell
research has brought new vitality to organoid research.
Major events in organoid development

Source of data: Am J Physiol Cell Physiol Magazine
The development achievements of contemporary organoids have been mainly
concentrated in the past decade.
In 2007, Hans Clevers' laboratory found that the stem cells of the small
intestine and colon were Lgr5+ cells through lineage tracing test.
In 2009, Hans Clevers' laboratory used single murine LGR5+ intestinal stem
cells to self-organize in vitro to form intestinal organoids with intestinal
crypt-villi structure.
In 2011, intestinal organoids developed from human pluripotent stem cells
and primary adult stem cells were successfully made. In the same year, the
retinal organoids cultivated from mouse embryonic stem cells were successfully
cultivated for the first time.
In 2012, retinal organoids developed from human pluripotent stem cells were
successfully cultivated.
In 2013, brain organoids developed from human pluripotent stem cells were
successfully cultivated. The liver, kidney and pancreatic organoids were
successfully cultivated.
In 2014, prostate and lung organoids were successfully cultivated.
In 2015, breast, fallopian tubes, and hippocampus organoids were
successfully cultivated.
In 2020, snake venomous organoids were successfully cultivated.
The hot topic of research on organoids is the patient-derived organoids
(PDOs), which are often called tumor organoids because they are usually used for
disease modeling, research and drug screening in tumor patients. The development
of tumor organoids began in 2013 and has been on an upward trend since then.
Tumor organoids are organoids obtained by biopsy, puncture or surgical removal
of tissue in matrigel for several weeks. While tumor organoids highly maintain
the heterogeneity of the source tumor and the heterogeneity between patients,
the morphology and scale between individual organoids remain basically uniform,
providing a fast and excellent technical platform for the fields of tumor
pathogenesis research, drug screening, personalized precision medicine,
regenerative medicine and other fields.
At present, 3D organoid culture technology has successfully cultivated a
large number of tissue-like organs with some key physiological structures and
functions, such as: kidney, liver, lung, intestine, brain, prostate, pancreas
and retina.
-03-
Cultivation of organoids
The culture of organoids can use somatic cells, adult stem cells (including
progenitor cells) or pluripotent stem cells. In 2009, intestinal organ
simulation technology was the first to make breakthroughs, and researchers found
that adult intestinal stem cells can proliferate and spontaneously organize in
vitro. It is characterized by the ability to express LGR5, a gene encoding the
Wnt agonist R-spondin receptor, while requiring specific molecules to surround
each other (such as Wnt, KGF and noggin). Based on this as a theoretical basis,
researchers have developed a three-dimensional culture system that can
reconstruct the appropriate environment of intestinal stem cells in vitro and
differentiate from intestinal epithelial cells or single LGR5+ stem cells to
organoids with self-renewal ability and maintain the villous structure of the
intestinal glands. The model can be continuously amplified for up to 3 months,
and the stable genome guarantees the advantages of purification and production
amplification. This method has since been used to culture various organoids from
epithelial tissues of other major organs.
Adult stem cell-derived organoid culture is usually established by
embedding isolated adult stem cells or single-cell suspensions of required organ
culture into an extracellular matrix (ECM) hydrogel. For example, intestinal
organs, crypt cells isolated from the small intestine or colon are sufficient to
cultivate organoids, and organoids can also be cultivated from isolated adult
intestinal stem cells.
Epithelial organoid culture medium is based on culture medium with added
growth factors related to the organ. Therefore, organelles extracted from other
tissues (such as respiratory tract, liver, pancreas, skin, bladder, brain,
heart) require supplementation of relevant growth factors in culture. For
example, the brain organoid culture process is shown below: Inducing pluripotent
stem cell (iPSC)-derived cells to grow in nerve-induced media, produce
neuroectoderm, embed in Matrigel, and grow in a rotating bioreactor or orbital
shaker to better spread and obtain three-dimensional brain organs. When exposed
to retinoic acid, brain organs form self-assembly and tissues through
self-assembly modes, forming different populations of neural progenitor cells,
including radial glial cells, which expand to form brain structures.

In addition to adult stem cells, pluripotent stem cells (including
inducible stem cells and embryonic stem cells) can also use their self-renewal
and differentiation capabilities to prepare organoids. Since organoids extracted
from pluripotent stem cells are formed by homogeneous population orientation
differentiation, tissue-specific cell types and their microenvironment must be
recreated in a dynamic process of awakening embryogenesis. Therefore,
pluripotent stem cell organoid culture must provide appropriate niche signals
during differentiation. Because this process is more complex, pluripotent stem
cell organoids often contain cell types different from model organs,
complicating the signaling environment and self-organization of the target
tissue.
1. Organoid culture in scientific research
1.1 Study on epithelial organoid interactions
Epithelial cells appear at all boundaries in contact with the outside
world, such as the skin, respiratory tract, lungs, and digestive tract. They are
the first barrier for the body to fight against pathogen infection and the first
cell to respond to pathogen infection. To maintain homeostasis and provide a
rapid response to infection, epithelial cells work closely with immune cells.
Therefore, in the epithelial area, it is also the area with the highest
concentration of immune cells in the system. Establishing a model of the
interaction between epithelial cells and immune cells is an important means to
study anti-infection immunity and post-injury immunity. The establishment of
epithelial organoids can accurately simulate the body's epithelial environment
and have also been developed to study the interaction between epithelial and
immune cells.

There are three co-cultivation modes
1. Treat organoids with recombinant cytokines present in extracellular
matrix to evaluate the effect of immune cell-derived cytokines on epithelial
cells. For example, IL-4 and IL-13 promote clumped cell differentiation, while
IL-22 supports stem cell proliferation and survival.
2. Dige the organ into a single cell, and then grow in the presence of
immune cells. Used to evaluate the effect of immune cells and immune
cell-derived cytokines (soluble or membrane binding) on organ growth and
differentiation, as well as the effect of epithelial cells on immune cell
phenotype.
3. Add (activated) immune cells, such as T cells or innate lymphoid cells
(ILCs) to the intact organoids in ECM or growth medium (suspended culture) to
evaluate the interaction between immune cells and epithelial cells. Reads for
these assays usually include organs formed by digestion and subsequent
transcription. Single-cell RNA sequencing or quantitative PCR (QPCR), imaging
and/or flow cytometry to evaluate epithelial and/or immune cell phenotypes. The
immune cells used in these co-cultures are either classified directly from mouse
tissues (e.g., spleen cells, intestinal intraepithelial lymphocytes, lamina
propria T cells, lamina propria ILCs or lung ILC2s), either directly from human
peripheral blood, or are first differentiated in vitro.

1.2 Study on T cell development in thymus organoids
The thymus is the central part of T-cell maturation and differentiation
from progenitor cells to mature naive lymphocytes. Bone marrow-derived T cell
progenitor cells are positively selected in the thymic cortex and then
negatively selected in the thymic medulla. These regions of the thymus are
composed of two different epithelial cells: cortical thymic epithelial cells
(CTECs) and medulla thymic epithelial cells (MTECs). 3D reconstruction of the
thymus has been shown to be the key to simulate its function, several thymus
organoids produced: these organ cultures are usually established from humans or
fetal rat or neonatal thymus tissue, but there are also reports of in vitro
differentiation of TEC-like cells and human embryonic stem cells, and these
cultures produce thymus-like structures. Living T cells are produced in vitro
and play a role when transplanted onto nude mice. Interestingly, although
long-term thymus-like cultures are possible (ex-vitro cultures for up to 56
days), cells lose their colony-forming ability during continuous passage.
Importantly, although a dual-energy TEC precursor has been found in adult mice,
thymus organs containing cTECs and mTECs have not yet been generated from single
stem cells. Furthermore, given that growth factors of certain dual-energy TEC
precursors in mice have been found (e.g., BMP 4 and IL-22), it can be tried
whether these factors can be used to maintain progenitor-derived organoids of
TEC.
2. Tumor microenvironment
Two main methods are used (taking non-small cell lung cancer as an
example)
In the holistic method (left), tumor biopsy tissue is cultured in the
environment between the gas-liquid interface, and cell suspensions of all tumor
cell types, including endogenous immune cells and other non-epithelial cell
types, promote the growth of tumor-specific T cells.

In the reduction simulation method (right), epithelial organoids are grown
from tumor biopsy tissue and are then co-cultured with autoimmune cells from the
peripheral blood of the same patient to promote the continuous expansion of
tumor-responsive cells.
Although the overall method allows the culture of tumor materials including
the entire tumor microenvironment and is therefore very similar to the situation
in vivo, it is not easy to maintain for a long time, while the reduction
simulation method allows long-term culture and expansion of tumor epithelium,
which makes wider and longer-term research possible.
3. Drug screening
3.1 Screening animal models for promoting cardiomyocyte growth compounds,
mainly mice, are widely used to study heart disease and provide valuable
results. However, due to the wide variation of many species of functional and
biological properties, their inferences about human heart disease and drug
safety are poor. Human pluripotent stem cells (hPSCs) can provide unlimited
sources of human cardiomyocytes for biomedical and drug research, potentially
bridging this gap. However, hPSC-derived cardiomyocytes in traditional 2D
cultures lack functional maturation, which in some cases hinders their ability
to accurately predict human biology and pathophysiology. Multicellular 3D human
organoids provide a more accurate model and are a potential solution to this
problem. Scientists from the Department of Biomedical Sciences at the University
of Queensland, Australia published an article at Cell Stem Cell, explaining
their new process of cultivating cardiac myocardial organoids based on 96-well
plates and then screening compounds.
The specific process is as follows:

Based on organoids, 5,000 compounds were screened for different functional compounds.

3.2 Applications for specific neural organoid culture and drug screening, first of all, neurospheres are cultured on different differentiation mediums (see the figure below for specific inducing factors and growth factors), to produce different brain organoids such as the brain, midbrain, hippocampus, and forebrain.

(Source: Stem Cells Say)
-04-
Application of organoids
As an emerging technology, organoids have great potential in the field of
scientific research, including developmental biology, disease pathology, cell
biology, regeneration mechanisms, precision medicine, and drug toxicity and
efficacy tests. Organoid culture provides a platform for studying human
development without ethical restrictions, provides a new platform for drug
screening, and is also a complement to the high amount of information of
existing 2D culture methods and animal model systems. In addition, organoids are
used for cell therapy in order to obtain cells closer to natural human
development.
By replacing damaged or diseased tissues through the reproduction of
organoid stem cells, organoids provide feasibility for autologous and allogeneic
cell therapies. This technology also has great potential in the field of
regenerative medicine in the future. Using this technology, CRISPR/Cas9 can
correct genetic abnormalities in vitro and can return healthy transgenic cells
to the patient's body and integrate them into the tissue later. In precision
medicine applications, patient-derived organoids have also proven to be valuable
diagnostic tools. Prior to treatment, in vitro drug responses were screened
using organoids from patient samples from patients to provide guidance and
predict treatment outcomes for patients with cancer and cystic fibrosis. With
the continuous development of organoid culture systems and their experimental
development technologies, organoids have been applied to major research
fields.

1. Modeling development and disease through organoids. Researchers can
simulate human development and disease through organoids, because organoids grow
from induced pluripotent stem cells produced by human stem cells or adult cells.
Their composition and structure are similar to the primary tissue and are easy
to manipulate and cryopreserve. This means that organoids can be used to study
human tissues derived from stem cells and are difficult to simulate by animal
models, and researchers need only a small amount of starting substance to
cultivate organoids.
Because it has similar spatial tissue to the corresponding organ, maintains
some key characteristics and can reproduce some physiological functions, it is
considered a new model for detecting human biology and diseases. Compared with
traditional research models such as cell lines, genetically engineered mice and
human xenografts (PDX), the organoid models (mouse-derived organoids, MDO and
human organoid patients-derived organoids, PDO) can not only be taken from tumor
tissues at all stages of normal tissue and tissue cancer, but also their culture
system is simple and easy to operate, with low time and money costs, and has
high efficiency. Therefore, it has been loved by researchers and was rated as
the 2017 annual technology in the field of life sciences by Nature Methods.
Comparison of main research models

Source: Science Magazine

Currently, most of the samples used by cancer alliance organizations such
as the International Cancer Genome Consortium (ICGC) and the Cancer Genome Atlas
(TCGA) are taken from primary tumors. In contrast, PDO can be taken from any
stage in the tumor development process, and only a small portion of the tumor
tissue is required to be cultured and amplified in vitro. Researchers have
obtained biopsies through puncture in liver cancer, pancreatic cancer and colon
cancer liver metastatic tissues and successfully conducted organoid culture in
vitro. It can even be cultured into organoids in vitro by circulating tumor
cells in prostate cancer patients. Researchers have also successfully cultured
organoids from normal cells of the urine tract and bronchial lavage, but it is
not clear whether these culture methods can be suitable for tumor organoid
cultures from these tissues.
2. Stem cell organoid engineering The advancement of stem cell
bioengineering technology has improved the ability to control cell types,
tissues and interactions, and organoid engineering is requiring manipulation of
each structural layer by directly modifying stem cells or controlling the
microenvironment. Now, scientists have developed a more precise synthetic
environment that can better control stem cell activity by modifying the bioinert
region of the matrix with signaling proteins. Organoid engineering technology is
particularly useful for developmental research with complex environmental
components in vivo and requires precise modeling.
3. Organoids and precision medical organoid technology is becoming a tool
for individualized treatment. Using organoid technology for individualized
treatment refers to formulating therapeutic drugs and methods suitable for this
individual through drug screening and genotyping of organoids in vitro. Up to
now, the responses of different tumor PDOs to traditional and under development
are diverse. Research on currently limited resources has found that the
treatment response shown by most PDOs is consistent with the corresponding
patient's initial response to treatment. PDOs can also be used to develop new
drugs against passive or acquired tolerance. More importantly, PDOs are highly
sensitive to drugs with cytotoxicity, so they can better predict the clinical
response of patients after use. Next, the researchers integrated the drug
response data of a large number of individual PDOs to find common
characteristics, and then conducted biomarker development research on a class of
similar patients.
3.1 Drug Screening Organoid cultures can be used for drug screening, which
can correlate the genetic background of the tumor with drug response. The
establishment of organoids from healthy tissues of the same patient provides the
opportunity to develop less toxic drugs by screening compounds that selectively
kill tumor cells without damaging healthy cells. Self-renewing hepatocyte
organoid cultures can be used to test the hepatotoxicity of potential new drugs
(one of the causes of drug failure in clinical trials).

Comparison of drug screening models
3.1.1 The advantages of organoid drug screening are fast: the success rate
of organoid construction and the culture speed are high. Conventionally, a
medicine screen can be performed after one week of organoid culture. The entire
process from sample collection to drug sensitivity results can be well
controlled within 2 weeks.
High flux: In terms of screenable drug flux, organoids can not only screen
multiple drugs on the well plate, but each drug can also test different
concentrations, and multiple experiments are carried out in parallel.
Strong clinical relevance: The clinical relevance and predictive
effectiveness of organoids used in cancer drug screening have been fully
confirmed in many studies. Vlachogiannis G team published a milestone study on
in vitro drug sensitivity testing for tumor organoids in Science, and 110
tissues were extracted from 71 metastatic gastrointestinal cancers to build
organoids, and a total of 55 anti-cancer drugs were tested. The research results
show that organoid drug screens achieved 93% specificity, 100% sensitivity, 88%
positive prediction rate and 100% negative prediction rate, showing extremely
high clinical correlation.
3.1.2 Process of organoid screening
The drug screening process includes three aspects: organoid construction,
evaluation, and drug sensitivity testing:
Organoid construction: The sample source of organoids is usually malignant
effusion such as tumor tissue or ascites. The mainstream culture methods include
the more commonly used positive gel drop method, the inverted gel drop method
suitable for tumor and testicular organoid culture, the gas-liquid interface
method suitable for gas-contact mucosal organoids (intestinal, respiratory
tract) culture, and the bioreactor method that requires large amplification
(brain organoids). First, the tumor sample tissue from the patient is
mechanically cut to obtain tumor cell mass, and then the cell mass enzyme is
digested into single cells. After separation and digestion, cells were embedded
in matrix gel and seeded on 96/384 well plates, and then covered with culture
medium and cytokine culture. Cell pellets of several hundred microns in diameter
can be used for drug screening. Important reagents unique to organoid culture
include digestive fluid, culture medium (such as Wnt, R-Spondin, Noggin and
other cytokines), and matrix gel (Matrigel, etc.).
Organoid evaluation: After cultivating organoids, the evaluation and
verification of organoids is also crucial. Organoids were identified from
multiple dimensions such as morphology, histopathology and molecular genetics
through gene sequencing, immunofluorescence, HE staining and other methods. The
purpose of the evaluation is to determine the consistency between the organoid
and the protumor, which is also a prerequisite for subsequent drug
screening.
Drug detection: The types of drugs that organoids can currently screen
include chemotherapeutic drugs, small-molecular targeted drugs, antibody drugs,
etc. The core detection indicators of drug screens are usually IC50 and cell
inhibition rate. According to these indicators, the drugs with the best effect
on tumor suppression are selected among the screened drugs. In China's
registered clinical practice, organoids use sensitivity detection of
chemotherapeutic drugs as the mainstream application, and organoids have great
room and application potential for detection of sensitivity of targeted drugs
and immunotherapy in the future.
3.1.3 Development direction of organoid medicine screening
Organoid drug screening and second-generation sequencing are used as
combination products. The two can be organically combined in clinical practice
and complement each other well. Second-generation sequencing detects the
patient's target mutations and potential drug-sensitive targets from the genetic
level, providing doctors and patients with preliminary drug choices, but the
results of second-generation sequencing alone cannot guarantee complete clinical
efficacy. Some research reports and clinical cases point out that the potential
targeted drugs screened by second-generation sequencing have not shown
effectiveness in actual clinical practice, and the uncertainty in this part can
be easily investigated through organoids.
3.2 Genotype analysis
The growth of organoids from different healthy organs and the cultures are
then whole-genome sequencing, which can analyze the organ-specific mutation
spectrum. By growing organoids from different regions of the same tumor, it can
be used to study intratumoral heterogeneity. Region-specific mutation profiles
can be revealed by whole-genome sequencing of organoids. Using similar methods
as described above, organoids can be used to study the effects of specific
compounds on mutation profiles of healthy cells and tumor cells.

Cancer is caused by the gradual accumulation of mutations in pathogenic
genes. Therefore, it is important to understand the mutation processes active
during tissue homeostasis and tumorigenesis. (Source: Zhongjun Yatai, Stem Cells
Say)
-05-
Organoid industry chain
The upstream companies in the organoid industry are mainly focused on
providing reagents and material raw materials for 3D cell culture, including
providing cell scaffold materials, extracellular matrix, cell growth factors,
culture media and bioreactors. Among them are relatively old reagent
manufacturers ThermoFisher, Sigma-Aldrich (now acquired by Merck), and a group
of entrepreneurial companies that have achieved great success. InSphero,
Switzerland, which provides scaffold-free three-dimensional cell culture
products, STEMCELL Technologies, Canada's largest biotech company, provides
professional cell culture medium and cell sorting products, and American company
Xcell Biosciences, which provides in vivo microenvironment simulation systems,
etc.

Main 3D cell culture technology
According to the data from Meticulous Research Analysis, in 2016, 3D tissue
culture accounted for about 9.3% of the global cell analysis and detection
market. The market was worth US$818.1 million in 2017, and it is expected to
grow at an annual compound growth rate of 8.7% during the period, reaching
US$1.242.6 billion in 2022. Among them, the United States contributed about
34.8% of the global 3D cell market, ranking first in the world. In 2016, China's
share of the global 3D cell market was far less than that of the United States,
but it is expected that China will grow at an annual compound growth rate of
11.8% in the next five years, becoming the country with the highest annual
compound growth rate and has market development potential.
The revenue points of the midstream and downstream companies in the
organoid industry are mainly to provide in vitro drug trial plans and disease
models to major new drug testing companies, namely clinical trial outsourcing
services. For example, Emulate, a biotech company established by Harvard Wyss
School of Bioengineering in 2013, Emulate and FDA will cooperate to evaluate and
identify the possibility of using Emulate's "Organs-on-Chips" technology as a
platform for toxicology testing, and have successively claimed to form strategic
cooperation with AstraZeneca and Roche; Dutch biotech company Mimetas has
developed a chip kidney and reached application cooperation agreements with
several pharmaceutical companies to use it for drug screening; listed company
Organovo has claimed to develop the first 3D printer for biological organs and
develop artificial liver and artificial kidney. In October 2017, it announced a
cooperation with Viscient Biosciences to further study liver disease.
The organoid industry has not yet formed a centralized industrial cluster
in the country. In addition to traditional foreign cell culture reagents and raw
material agents, mid- and downstream companies are relatively sparse. Several
startup companies have emerged in Beijing, Shanghai and Guangzhou.
The organoid industry is developing rapidly in European countries, which is
indispensable to the earliest start and accumulation of European organoid
scientific research. Hubrecht Organoid Technology (HUB), founded by Hans
Clevers, the leader of organoids, is the earliest R&D center for organoids.
HUB technology license has promoted the emergence of a number of organoid
companies including Epistem, Cellesce, Crown Biosciences, and STEMCELL
Technologies. In the field of organoids, China has actually shown a significant
increase in the number of scientific research in recent years, especially in the
two years from 2019 to 2020, and the number of published documents has jumped
from sixth place (2009-2019) to second place (2020), second only to the United
States. Referring to the European organoid development model, it can be expected
that the improvement of China's basic scientific research accumulation will
accelerate organoid production.
-06-
Market competition for organoids
Organoids have shown their strong development potential worldwide, and a
certain market competition pattern has been formed abroad. Many companies are
developing rapidly, such as AIVITA Biomedical, System1 Biosciences, JangoBio,
etc. But there has not yet been a real competitive market in China.

Some domestic and foreign organoid companies
Data source: Zhongjun Yatai compiled based on public information
-07-
The challenge of organoids
Organoid culture technology is currently in a stage of technological
explosion and scientific research results. The industry has great prospects for
development, but it also faces great challenges. For example, how to use the
stem cells of human embryos to establish a lasting and stable in vitro model;
how to more realistically simulate and reduce the human microenvironment; how to
achieve mass production of scientific research-related products, how to convert
them into clinical products, etc.
As a new drug screen model, although the cost of organoids is lower than
that of PDX, it is still much higher than that of cell lines. The cost of
organoids is high, including the matrigel used for cultivation. The commonly
used matrigel is Matrigel® from BD Biosciences, a company in the United States.
It is in a relatively monopoly position in the industry and has a higher price.
Matrigel can produce bioactive matrix materials similar to the basement membrane
of mammalian cells, helping multiple types of cells to achieve attachment and
differentiation. Matrigel is derived from mouse sarcoma cell lines. In addition
to the high cost problem, there is also a certain variability between batches.
And since it is an animal source, there are limitations on the detection of
organic drugs. Considering that mouse-derived extracellular matrix has certain
interference with drug screening experiment results, the engineering technology
development of matrix for the synthesis of non-animal-derived matrix gels with
small exogenous differences will be one of the key issues that need to be solved
in the industrialization of organoids. In addition to matrix gel, culture also
involves the use of a combination of multiple cytokines, and cell growth factors
are usually expensive. Choosing better-effect cytokines and trying to reduce the
number of cytokines used can also bring room for cost reduction.
At present, most organoids do not have a vascularized structure. Therefore,
as the volume of the organoid increases, the organoids are limited by the loss
of oxygen and the increase in metabolic waste, which may lead to tissue
necrosis. There have been research on constructing tumor organoids in the
microenvironment of vascular endothelial cells, and co-culture organoid tumor
cells and vascular endothelial cells on Matrigel to generate vascular structures
in order to solve the problem of organoid vascularization deletion.
Difficulties beyond vascularization also include simulating the interaction
between tumor and the immune environment. In 2019, the journal Nature Protocol
published related protocols co-cultured by tumor organoids and immune cells,
which can reflect and simulate some of the characteristics of the tumor
microenvironment. As an example, the interaction between organoids and immune
cells can be reshape the interaction between organoids and immune cells by
adding activated immune cells to the culture medium, growing with immune cells
after the tissue is digested into single cells, and adding recombinant cytokines
in ECM.
Compared with a single organoid, the construction of an organoid system can
make a more comprehensive assessment of the efficacy and potential toxicity of
the drug. At present, organoids can only detect the inhibitory effect of drugs
on tumors, and cannot predict whether there are other side effects and safety
risks in other organs and tissues. To solve this problem, in 2017, Skardal et
al. constructed an organoid system composed of the heart, lungs and liver
integrated into the closed circulation concern body to achieve the purpose of
comprehensively revealing the toxicity and efficacy of drugs to different
organs.
Repeatability and consistency are also major bottlenecks in organoid
development, which is largely due to the lack of process control and the gap in
industry standards. Excessive participation of human factors and low degree of
automation in the process of organoid culture leads to large errors caused by
accidental system. At the same time, organoid detection methods are very scarce.
Live observation is mainly focused on morphological observation, and breakpoint
observation is focused on the detection of various indicators based on
fluorescence. Optical, electrochemical and other means that can detect various
indicators of organoids in real time are still lacking. At present, many
researchers are committed to creating newer organoids and making organoids that
have not been made before. We can make organoids of the hippocampus, pituitary
gland, gland, spleen, and kidney, but it is difficult to determine that an
organoid that meets the requirements needs to meet the statistical indicators of
those individuals such as size, shape, gene expression, etc., and populations
such as variance between organoids. This will limit the efficient research of
organoids and the transformation into clinical research.
Engineering control during organoid culture is also an urgent problem to be
solved. Currently, organoid cultures mostly use Matrigel hydrogel as the culture
medium, a colloidal mixture of Engelbreth-Holm-Swarm (EHS) mouse sarcoma cells
produced by Corning Life Sciences. Matrigel is difficult to apply in many
treatment scenarios in humans because it contains exogenous ingredients. On the
other hand, although there have been some examples of combining organoids and
microfluidic control technology, it is still immature to use microfluidic chips
to simulate the fluid environment in which organoids survive. How to use
microfluidic control and other technologies to control the fluid
microenvironment during organoid culture is an urgent problem to be solved. At
the same time, the diameter of existing organoids is about 100-500μm. Although
it has a certain degree of scale effect, it is still difficult to simulate
scenes of real tissues and organs. If organoids of a larger scale are to be
created, the vascularization of organoids is also a very important issue.
-08-
The future development of organoids
1. Policy promotion
On January 28, 2021, the Ministry of Science and Technology issued the
"Notice on Soliciting Opinions on the 2021 Annual Project Application Guide for
Six Key Special Projects of the National Key R&D Plan for the 14th Five-Year
Plan", and listed the "organoid-based malignant tumor disease model" as the
first batch of key special tasks to be launched in the "14th Five-Year Plan"
national key R&D plan. In addition, the "14th Five-Year Plan" National Key
R&D Plan pointed out that organoids, as a major technological breakthrough,
are used in the establishment of disease models, and can be used to study stem
cell mutation, heterogeneity and its mechanism in pathological states, explore
new targets for disease diagnosis and treatment, and explore new diagnostic and
treatment strategies. In addition, in 2022, the U.S. Senate and House of
Representatives approved the U.S. Food and Drug Administration Modernization Act
2.0, canceling the mandatory requirement for animal experiments for new drugs
before clinical practice, and recommending some non-animal detection methods,
including organoids, cell models, organ chips and microphysiological systems.
Organoid technology will have great application value and development prospects
in the future.

Data source: Ministry of Science and Technology
2. Development of organoid technology
Traditional preparation method is a 3D culture technology that relies on
growth factors and has its limitations (such as insufficient control of
organoids and local environment). In addition, traditional preparation methods
cannot replicate the complex and dynamic microenvironment in the development of
organs well, and this microenvironment is a favorable factor in organ formation,
which makes it difficult to obtain a more complete organoid process similar to
the development of the internal organs.
The most cutting-edge at present is the "organoid chip" technology composed
of organ chip technology and instruments. Organoids are not the only ones, the
integration of multiple models is the king, and research based on in situ tissue
and animal models will still be the gold standard for biomedical research.
Organoids have become an attractive and easy-to-replicate human tissue
model for humans, but taking brain organoids as an example, there are still many
differences between them and in situ cell types, which may confuse people's
understanding of endogenous brain function and may propose misleading hypotheses
about neuropathology, which may ultimately mislead treatments. This requires
in-depth understanding and characterization of each cellular properties in in
situ tissue, including cell types characterized by methods such as
transcriptome, epigenome, and protein abundance; cell structural tissues
including spatial tissue, morphological and physical connectivity parameters;
and cell and tissue functional indicators including metabolic status and
electrophysiology.
Today, organoids cannot stand on their own, and in the future, organoids do
not need to stand on their own. The integration of multiple models is the best
solution for research. Looking ahead, there is great prospects for organoid
research. The highly simulated organoid disease model is expected to continue to
make new progress in the fields of precision medicine, regenerative medicine,
etc. At the same time, "organoid +" is expected to bring new growth points to
organoid research. Organoid technology combined with live real-time imaging
technology is expected to allow people to observe early human development for
the first time; combined with biological 3D printing, it is expected to realize
functional organoid-based treatment; combined with the "Human Cell Atlas (HCA)"
technology, the organoid cell map will promote disease-centered research
including rare genetic diseases, complex multi-factor diseases, and precise
tumor treatment.